VarScan is a Java-based, platform-independent software tool that can detect variants in next-generation sequencing (NGS) data. It employs a robust statistical approach to call variants and is able to handle; germline variants, multi-sample variants, somatic mutations and somatic copy number alterations.

Non-Exclusive Agreement Terms

  • Field: All uses, including research and commercial applications
  • Territory: Worldwide
  • Term: 3 years
  • Annual License Fee: $10,000 per year
  • Annual Use Limit: 1,000 Samples per year
  • Sample: means any unique pair of sequence/reference comparison where a sequence of nucleic acids is compared to a reference using Software or Derivative Works of Software. The reference may be a single sequence or collection of sequences.

>> VarScan Non-Exclusive License Agreement (.pdf)

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